Uses of Class
uk.ac.vamsas.objects.core.AlignmentAnnotation

Packages that use AlignmentAnnotation
uk.ac.vamsas.objects   
uk.ac.vamsas.objects.core   
 

Uses of AlignmentAnnotation in uk.ac.vamsas.objects
 

Methods in uk.ac.vamsas.objects with parameters of type AlignmentAnnotation
 void EmptyDocumentUpdater.update(AlignmentAnnotation vobj)
           
 void IDocumentUpdater.update(AlignmentAnnotation vobj)
           
 

Uses of AlignmentAnnotation in uk.ac.vamsas.objects.core
 

Methods in uk.ac.vamsas.objects.core that return AlignmentAnnotation
 AlignmentAnnotation Alignment.getAlignmentAnnotation(int index)
          Method getAlignmentAnnotation.
 AlignmentAnnotation[] Alignment.getAlignmentAnnotation()
          Method getAlignmentAnnotation.Returns the contents of the collection in an Array.
 AlignmentAnnotation Alignment.removeAlignmentAnnotationAt(int index)
          Method removeAlignmentAnnotationAt.
 

Methods in uk.ac.vamsas.objects.core with parameters of type AlignmentAnnotation
 void Alignment.addAlignmentAnnotation(AlignmentAnnotation vAlignmentAnnotation)
           
 void Alignment.addAlignmentAnnotation(int index, AlignmentAnnotation vAlignmentAnnotation)
           
 boolean Alignment.removeAlignmentAnnotation(AlignmentAnnotation vAlignmentAnnotation)
          Method removeAlignmentAnnotation.
 void Alignment.setAlignmentAnnotation(int index, AlignmentAnnotation vAlignmentAnnotation)
           
 void Alignment.setAlignmentAnnotation(AlignmentAnnotation[] vAlignmentAnnotationArray)