uk.ac.vamsas.test.simpleclient.simpleapp
Class VamsasDatastore

java.lang.Object
  extended byuk.ac.vamsas.test.simpleclient.simpleapp.VamsasDatastore

public class VamsasDatastore
extends java.lang.Object


Constructor Summary
VamsasDatastore(ClientDoc cdoc, java.util.Hashtable vobj2jv, java.util.IdentityHashMap jv2vobj, Entry provEntry)
           
 
Method Summary
protected  void bindjvvobj(java.lang.Object jvobj, Vobject vobj)
           
protected  Vobject getjv2vObj(java.lang.Object jvobj)
           
protected  java.lang.Object getvObj2jv(Vobject vobj)
           
 void storeVAMSAS(java.lang.Object fromAppsDatamodel)
          put the alignment viewed by AlignViewport into cdoc.
 void updateToJalview()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

VamsasDatastore

public VamsasDatastore(ClientDoc cdoc,
                       java.util.Hashtable vobj2jv,
                       java.util.IdentityHashMap jv2vobj,
                       Entry provEntry)
Method Detail

getjv2vObj

protected Vobject getjv2vObj(java.lang.Object jvobj)
Returns:
the Vobject bound to Jalview datamodel object

getvObj2jv

protected java.lang.Object getvObj2jv(Vobject vobj)
Parameters:
vobj -
Returns:
Jalview datamodel object bound to the vamsas document object

bindjvvobj

protected void bindjvvobj(java.lang.Object jvobj,
                          Vobject vobj)

storeVAMSAS

public void storeVAMSAS(java.lang.Object fromAppsDatamodel)
put the alignment viewed by AlignViewport into cdoc.


updateToJalview

public void updateToJalview()