uk.ac.vamsas.objects.utils
Class GlyphDictionary

java.lang.Object
  extended byuk.ac.vamsas.objects.utils.GlyphDictionary

public class GlyphDictionary
extends java.lang.Object

dict attribute values for glyph symbol sets found in uk.ac.vamsas.objects.core.AnnotationElement TODO: add validators and multilength symbols.

Author:
JimP

Field Summary
static java.lang.String DEFAULT
          default glyph type attribute indicates a UTF8 character
static java.lang.String PROTEIN_HD_HYDRO
          kyte and doolittle hydrophobicity TODO: specify this glyph set.
static java.lang.String PROTEIN_SS_3STATE
          standard H, E, or C three state secondary structure assignment.
 
Constructor Summary
GlyphDictionary()
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

PROTEIN_SS_3STATE

public static final java.lang.String PROTEIN_SS_3STATE
standard H, E, or C three state secondary structure assignment.

See Also:
Constant Field Values

DEFAULT

public static final java.lang.String DEFAULT
default glyph type attribute indicates a UTF8 character

See Also:
Constant Field Values

PROTEIN_HD_HYDRO

public static final java.lang.String PROTEIN_HD_HYDRO
kyte and doolittle hydrophobicity TODO: specify this glyph set.

See Also:
Constant Field Values
Constructor Detail

GlyphDictionary

public GlyphDictionary()