Uses of Class
uk.ac.vamsas.objects.core.MapType

Packages that use MapType
uk.ac.vamsas.objects.core   
uk.ac.vamsas.objects.utils   
 

Uses of MapType in uk.ac.vamsas.objects.core
 

Subclasses of MapType in uk.ac.vamsas.objects.core
 class Map
          the local mapType maps from the parent sequence coordinate frame to the reference frame defined by the dbRef element.
 class SequenceMapping
          Class SequenceMapping.
 

Methods in uk.ac.vamsas.objects.core that return MapType
static MapType Map.unmarshal(java.io.Reader reader)
          Method unmarshal.
static MapType MapType.unmarshal(java.io.Reader reader)
          Method unmarshal.
static MapType SequenceMapping.unmarshal(java.io.Reader reader)
          Method unmarshal.
 

Uses of MapType in uk.ac.vamsas.objects.utils
 

Methods in uk.ac.vamsas.objects.utils with parameters of type MapType
static MapList Range.parsemapType(MapType maprange, int localu, int mappedu)
           
static MapList Range.parsemapType(MapType map)
          Parse map with default units of 1,1
static void Range.initMapType(MapType maprange, MapList ml, boolean setUnits)
          initialise a MapType object from a MapList object.
static void Range.initMapType(MapType maprange, MapList ml, boolean setUnits, boolean reverse)