Uses of Class
uk.ac.vamsas.objects.core.AlignmentSequenceAnnotation

Packages that use AlignmentSequenceAnnotation
uk.ac.vamsas.objects   
uk.ac.vamsas.objects.core   
 

Uses of AlignmentSequenceAnnotation in uk.ac.vamsas.objects
 

Methods in uk.ac.vamsas.objects with parameters of type AlignmentSequenceAnnotation
 void EmptyDocumentUpdater.update(AlignmentSequenceAnnotation vobj)
           
 void IDocumentUpdater.update(AlignmentSequenceAnnotation vobj)
           
 

Uses of AlignmentSequenceAnnotation in uk.ac.vamsas.objects.core
 

Methods in uk.ac.vamsas.objects.core that return AlignmentSequenceAnnotation
 AlignmentSequenceAnnotation AlignmentSequence.getAlignmentSequenceAnnotation(int index)
          Method getAlignmentSequenceAnnotation.
 AlignmentSequenceAnnotation[] AlignmentSequence.getAlignmentSequenceAnnotation()
          Method getAlignmentSequenceAnnotation.Returns the contents of the collection in an Array.
 AlignmentSequenceAnnotation AlignmentSequence.removeAlignmentSequenceAnnotationAt(int index)
          Method removeAlignmentSequenceAnnotationAt.
 

Methods in uk.ac.vamsas.objects.core with parameters of type AlignmentSequenceAnnotation
 void AlignmentSequence.addAlignmentSequenceAnnotation(AlignmentSequenceAnnotation vAlignmentSequenceAnnotation)
           
 void AlignmentSequence.addAlignmentSequenceAnnotation(int index, AlignmentSequenceAnnotation vAlignmentSequenceAnnotation)
           
 boolean AlignmentSequence.removeAlignmentSequenceAnnotation(AlignmentSequenceAnnotation vAlignmentSequenceAnnotation)
          Method removeAlignmentSequenceAnnotation.
 void AlignmentSequence.setAlignmentSequenceAnnotation(int index, AlignmentSequenceAnnotation vAlignmentSequenceAnnotation)
           
 void AlignmentSequence.setAlignmentSequenceAnnotation(AlignmentSequenceAnnotation[] vAlignmentSequenceAnnotationArray)