@article(ATS97,
 author       = "J.D. Alfonzo and O. Thiemann and L. Simpson",
 year         = "1997",
 title        = "The Mechanism of Insertion/Deletion {RNA} Editing in Kinetoplastid Mitochondria",
 journal      = "Nucleic Acids Research",
 volume       = "25",
 number       = "19",
 pages        = "3751--3759",
 doi          = "10.1093/nar/25.19.3571",
)
@article(BBD07,
 author       = "F. Biegler and M.J. Burrell and M. Daley",
 year         = "2007",
 title        = "Regulated {RNA} Rewriting: Modelling {RNA} Editing with Guided Insertion",
 journal      = "Theoretical Computer Science",
 volume       = "387",
 number       = "2",
 pages        = "103--112",
 doi          = "10.1016/j.tcs.2007.07.030",
)
@article(Blum1990189,
 author       = "B. Blum and N. Bakalara and L. Simpson",
 year         = "1990",
 title        = "A Model for RNA Editing in Kinetoplastid Mitochondria: RNA Molecules Transcribed From Maxicircle DNA Provide the Edited Information",
 journal      = "Cell",
 volume       = "60",
 pages        = "189--198",
 doi          = "10.1016/0092-8674(90)90735-W",
)
@inproceedings(FWHH05,
 author       = "Xuezheng Fu and Hao Wang and W. Harrison and R. Harrison",
 year         = "2005",
 title        = "{RNA} Pseudoknot Prediction using Term Rewriting",
 booktitle    = "Proc.\ BIBE'05, Minneapolis",
 publisher    = "IEEE Computer Society",
 pages        = "169--176",
 doi          = "10.1109/BIBE.2005.50",
)
@article(Hea87:bmb,
 author       = "T. Head",
 year         = "1987",
 title        = "Formal Language Theory and {DNA}: An Analysis of the Generative Capacity of Specific Recombinant Behaviors",
 journal      = "Bulletin of Mathematical Biology",
 volume       = "49",
 number       = "6",
 pages        = "737--759",
 doi          = "10.1016/S0092-8240(87)90018-8",
)
@article(HW04,
 author       = "D. Hofbauer and J. Waldmann",
 year         = "2004",
 title        = "Deleting String Rewriting Systems Preserve Regularity",
 journal      = "Theoretical Computer Science",
 volume       = "327",
 pages        = "301--317",
 doi          = "10.1016/j.tcs.2004.04.009",
)
@book(HU79,
 author       = "J.E. Hopcroft and J.D. Ullman",
 year         = "1979",
 title        = "Introduction to Automata Theory, Languages and Computation",
 publisher    = "Addison-Wesley",
)
@article(CH91:dam,
 author       = "K. Cullik II and T. Harju",
 year         = "1991",
 title        = "Splicing Semigroups and Dominoes and {DNA}",
 journal      = "Discrete Applied Mathematics",
 volume       = "31",
 number       = "3",
 pages        = "261--271",
 doi          = "10.1016/0166-218X(91)90054-Z",
)
@inproceedings(L08,
 author       = "P. Leupold",
 year         = "2008",
 title        = "On Regularity-Preservation by String-Rewriting Systems",
 editor       = "C. Mart\'{\i }n-Vide and F. Otto and H. Fernau",
 booktitle    = "Proc.\ LATA 2008",
 publisher    = "LNCS 5196",
 pages        = "345--356",
 doi          = "10.1007/978-3-540-88282-4\_32",
)
@article(MPRV05,
 author       = "M. Margenstern and G. Paun and Y. Rogozhin and S. Verlan",
 year         = "2005",
 title        = "Context-free Insertion-deletion Systems",
 journal      = "Theoretical Computer Science",
 volume       = "330",
 pages        = "339--348",
 doi          = "10.1016/j.tcs.2004.06.031",
)
@article(Pix96:dam,
 author       = "D. Pixton",
 year         = "1996",
 title        = "Regularity of Splicing Languages",
 journal      = "Discrete Applied Mathematics",
 volume       = "70",
 number       = "1",
 pages        = "57--79",
 doi          = "10.1016/0166-218X(95)00079-7",
)
@article(vdSpekEtAl91,
 author       = "H. van der Spek and G.J. Arts and R.R. Zwaal and J. van den Burg and P. Sloof and R. Benne",
 year         = "1991",
 title        = "Conserved Genes Encode Guide RNAs in Mitochondria of \emph {Crithidia Fasciculata}",
 journal      = "The EMBO Journal",
 volume       = "10",
 number       = "5",
 pages        = "1217--1224",
)
@article(StuartEtAl97,
 author       = "K. Stuart and T.E. Allen and S. Heidmann and S.D. Seiwert",
 year         = "1997",
 title        = "RNA editing in kinteoplastid protozoa",
 journal      = "Micorbiology and Molecular Biology Reviews",
 volume       = "61",
 number       = "1",
 pages        = "105--120",
)
@article(TY03,
 author       = "A. Takahara and T. Yokomori",
 year         = "2003",
 title        = "On the Computational Power of Insertion-Deletion Systems",
 journal      = "Natural Computing",
 volume       = "2",
 number       = "4",
 pages        = "321--336",
 doi          = "10.1023/B:NACO.0000006769.27984.23",
)
@inproceedings(Zan10:lata,
 author       = "H. Zantema",
 year         = "2010",
 title        = "Complexity of Guided Insertion-Deletion in {RNA}-Editing",
 editor       = "A.-H. Dediu and H. Fernau and C. Mart\'{\i }n-Vide",
 booktitle    = "Proc.\ LATA 2010",
 publisher    = "LNCS 6031",
 pages        = "608--619",
 doi          = "10.1007/978-3-642-13089-2\_51",
)