@article(baumann2020modeling, author = {Fabian Baumann and Lorenz-Spreen, Philipp and Igor M. Sokolov and Michele Starnini}, year = {2020}, title = {Modeling Echo Chambers and Polarization Dynamics in Social Networks}, journal = {Phys. Rev. Lett.}, volume = {124}, pages = {048301}, doi = {10.1103/PhysRevLett.124.048301}, ) @inproceedings(nbSqPO2019, author = {Nicolas Behr}, year = {2019}, title = {{Sesqui-Pushout Rewriting: Concurrency, Associativity and Rule Algebra Framework}}, editor = {Rachid Echahed and Detlef Plump}, booktitle = {{Proceedings of theTenth International Workshop on Graph Computation Models (GCM 2019) in Eindhoven, The Netherlands}}, series = {Electronic Proceedings in Theoretical Computer Science}, volume = {309}, publisher = {Open Publishing Association}, pages = {23--52}, doi = {10.4204/eptcs.309.2}, ) @inproceedings(Behr2021, author = {Nicolas Behr}, year = {2021}, title = {{On Stochastic Rewriting and Combinatorics via Rule-Algebraic Methods}}, editor = {Patrick Bahr}, booktitle = {Proceedings 11th International Workshop on Computing with Terms and Graphs (TERMGRAPH 2020)}, volume = {334}, publisher = {Open Publishing Association}, pages = {11--28}, doi = {10.4204/eptcs.334.2}, ) @inproceedings(bdg2016, author = {Nicolas Behr and Vincent Danos and Ilias Garnier}, year = {2016}, title = {Stochastic mechanics of graph rewriting}, booktitle = {Proceedings of the 31st Annual {ACM}/{IEEE} Symposium on Logic in Computer Science - {LICS} {'}16}, publisher = {{ACM} Press}, pages = {46--55}, doi = {10.1145/2933575.2934537}, ) @article(bdg2019, author = {Nicolas Behr and Vincent Danos and Ilias Garnier}, year = {2020}, title = {{Combinatorial Conversion and Moment Bisimulation for Stochastic Rewriting Systems}}, journal = {{Logical Methods in Computer Science}}, volume = {{Volume 16, Issue 3}}, doi = {10.4204/EPTCS.323.4}, ) @article(behrCRRC, author = {Nicolas Behr and Jean Krivine}, year = {2021}, title = {Compositionality of {R}ewriting {R}ules with {C}onditions}, journal = {{Compositionality}}, volume = {3}, doi = {10.32408/compositionality-3-2}, ) @article(BK2020, author = {Nicolas Behr and Jean Krivine and Jakob L. Andersen and Daniel Merkle}, year = {2021}, title = {{Rewriting theory for the life sciences: A unifying theory of CTMC semantics}}, journal = {Theoretical Computer Science}, volume = {884}, pages = {68--115}, doi = {10.1016/j.tcs.2021.07.026}, ) @article(bp2019-ext, author = {Nicolas Behr and Pawel Sobocinski}, year = {2020}, title = {{Rule Algebras for Adhesive Categories (extended journal version)}}, journal = {{Logical Methods in Computer Science}}, volume = {{Volume 16, Issue 3}}, doi = {10.23638/LMCS-16(3:2)2020}, ) @article(DBLP:journals/tcss/BolzernCN20, author = {Paolo Bolzern and Patrizio Colaneri and De Nicolao, Giuseppe}, year = {2020}, title = {Opinion Dynamics in Social Networks: The Effect of Centralized Interaction Tuning on Emerging Behaviors}, journal = {IEEE Transactions on Computational Social Systems}, volume = {7}, number = {2}, pages = {362--372}, doi = {10.1109/TCSS.2019.2962273}, ) @inproceedings(Corradini2006, author = {Andrea Corradini and Tobias Heindel and Frank Hermann and Barbara K\"{o}nig}, year = {2006}, title = {{Sesqui-Pushout Rewriting}}, editor = {A. Corradini and H. Ehrig and U. Montanari and L. Ribeiro and G. Rozenberg}, booktitle = {Graph Transformations (ICGT 2006)}, series = {Lecture Notes in Computer Science}, volume = {4178}, publisher = {Springer Berlin Heidelberg}, pages = {30--45}, doi = {10.1007/11841883_4}, ) @article(Durrett2012, author = {Richard Durrett and James P. Gleeson and Alun L. Lloyd and Peter J. Mucha and Feng Shi and David Sivakoff and Joshua E. S. Socolar and Chris Varghese}, year = {2012}, title = {Graph fission in an evolving voter model}, journal = {Proceedings of the National Academy of Sciences}, volume = {109}, number = {10}, pages = {3682--3687}, doi = {10.1073/pnas.1200709109}, ) @article(DBLP:journals/jot/EhmesFS19, author = {Sebastian Ehmes and Lars Fritsche and Andy Sch{\"{u}}rr}, year = {2019}, title = {SimSG: Rule-based Simulation using Stochastic Graph Transformation}, journal = {J. Object Technol.}, volume = {18}, number = {3}, pages = {1:1--17}, doi = {10.5381/jot.2019.18.3.a1}, ) @article(Eydgahi2013MSB, author = {Hoda Eydgahi and William W Chen and Jeremy L Muhlich and Dennis Vitkup and John N Tsitsiklis and Peter K Sorger}, year = {2013}, title = {Properties of cell death models calibrated and compared using Bayesian approaches}, journal = {Molecular Systems Biology}, volume = {9}, number = {1}, pages = {644}, doi = {10.1038/msb.2012.69}, ) @article(Gillespie1977, author = {Daniel T. Gillespie}, year = {1977}, title = {Exact stochastic simulation of coupled chemical reactions}, journal = {The Journal of Physical Chemistry}, volume = {81}, number = {25}, pages = {2340--2361}, doi = {10.1021/j100540a008}, ) @article(Gross2008, author = {Thilo Gross and Bernd Blasius}, year = {2008}, title = {Adaptive coevolutionary networks: a review}, journal = {J. R. Soc. Interface}, volume = {5}, number = {20}, pages = {259--271}, doi = {10.1098/rsif.2007.1229}, ) @inproceedings(HLM06FI, author = {Reiko Heckel and Georgios Lajios and Sebastian Menge}, year = {2004}, title = {Stochastic Graph Transformation Systems}, editor = {Hartmut Ehrig and Gregor Engels and Parisi-Presicce, Francesco and Grzegorz Rozenberg}, booktitle = {Graph Transformations}, publisher = {Springer Berlin Heidelberg}, pages = {210--225}, doi = {10.1007/978-3-540-30203-2_16}, ) @article(DBLP:journals/toc/KempeKT15, author = {David Kempe and Jon M. Kleinberg and {\'{E}}va Tardos}, year = {2015}, title = {Maximizing the Spread of Influence through a Social Network}, journal = {Theory Comput.}, volume = {11}, pages = {105--147}, doi = {10.4086/toc.2015.v011a004}, ) @article(klamser2017zealotry, author = {Pascal P. Klamser and Marc Wiedermann and Jonathan F. Donges and Reik V. Donner}, year = {2017}, title = {Zealotry effects on opinion dynamics in the adaptive voter model}, journal = {Phys. Rev. E}, volume = {96}, pages = {052315}, doi = {10.1103/PhysRevE.96.052315}, ) @article(Klinke2014InSM, author = {David J. Klinke}, year = {2014}, title = {In silico model\IeC{-}based inference: A contemporary approach for hypothesis testing in network biology}, journal = {Biotechnology Progress}, volume = {30}, doi = {10.1002/btpr.1982}, ) @inproceedings(giese2012, author = {Christian Krause and Holger Giese}, year = {2012}, title = {{Probabilistic Graph Transformation Systems}}, editor = {Hartmut Ehrig and Gregor Engels and Hans-J{\"o}rg Kreowski and Grzegorz Rozenberg}, booktitle = {Graph Transformations}, series = {Lecture Notes in Computer Science}, volume = {7562}, publisher = {Springer Berlin Heidelberg}, address = {Berlin, Heidelberg}, pages = {311--325}, doi = {10.1007/978-3-642-33654-6_21}, ) @inproceedings(eMoflon, author = {Erhan Leblebici and Anthony Anjorin and Andy Sch{\"u}rr}, year = {2014}, title = {Developing eMoflon with eMoflon}, editor = {Di Ruscio, Davide and D{\'a}niel Varr{\'o}}, booktitle = {Theory and Practice of Model Transformations}, series = {Lecture Notes in Computer Science}, volume = {8568}, publisher = {Springer International Publishing}, address = {Cham}, pages = {138--145}, doi = {10.1007/978-3-319-08789-4_10}, ) @article(DBLP:journals/kbs/LiuYWLLT16, author = {Weiyi Liu and Kun Yue and Hong Wu and Jin Li and Donghua Liu and Duanping Tang}, year = {2016}, title = {Containment of competitive influence spread in social networks}, journal = {Knowl. Based Syst.}, volume = {109}, pages = {266--275}, doi = {10.1016/j.knosys.2016.07.008}, ) @article(newman2008physics, author = {Mark Newman}, year = {2008}, title = {The physics of networks}, journal = {Physics Today}, volume = {61}, number = {11}, pages = {33--38}, doi = {10.1063/1.3027989}, ) @article(read2008dynamic, author = {Jonathan M Read and Ken T.D Eames and W. John Edmunds}, year = {2008}, title = {Dynamic social networks and the implications for the spread of infectious disease}, journal = {Journal of The Royal Society Interface}, volume = {5}, number = {26}, pages = {1001--1007}, doi = {10.1098/rsif.2008.0013}, ) @article(DBLP:journals/kbs/RiquelmeCMS18, author = {Fabi{\'{a}}n Riquelme and Pablo Gonzalez Cantergiani and Xavier Molinero and Maria J. Serna}, year = {2018}, title = {Centrality measure in social networks based on linear threshold model}, journal = {Knowl. Based Syst.}, volume = {140}, pages = {92--102}, doi = {10.1016/j.knosys.2017.10.029}, ) @article(VIATRA, author = {D{\'{a}}niel Varr{\'{o}} and G{\'{a}}bor Bergmann and {\'{A}}bel Heged\"{u}s and {\'{A}}kos Horv{\'{a}}th and Istv{\'{a}}n R{\'{a}}th and Zolt{\'{a}}n Ujhelyi}, year = {2016}, title = {Road to a reactive and incremental model transformation platform: three generations of the {VIATRA} framework}, journal = {Software {\&} Systems Modeling}, volume = {15}, number = {3}, pages = {609--629}, doi = {10.1007/s10270-016-0530-4}, ) @inproceedings(DEMOCLES, author = {Gergely Varr{\'o} and Frederik Deckwerth}, year = {2013}, title = {A Rete Network Construction Algorithm for Incremental Pattern Matching}, editor = {Keith Duddy and Gerti Kappel}, booktitle = {Theory and Practice of Model Transformations (ICMT 2013)}, series = {Lecture Notes in Computer Science}, volume = {7909}, publisher = {Springer Berlin Heidelberg}, pages = {125--140}, doi = {10.1007/978-3-642-38883-5_13}, ) @article(zschaler2012early, author = {Gerd Zschaler and Gesa A. B\"ohme and Sei\ss{}inger, Michael and Cristi\'an Huepe and Thilo Gross}, year = {2012}, title = {Early fragmentation in the adaptive voter model on directed networks}, journal = {Phys. Rev. E}, volume = {85}, pages = {046107}, doi = {10.1103/PhysRevE.85.046107}, )